This extensively expanded third edition offers a practical introduction to Bio Data Science. With a hands-on approach to learning, this book offers ample opportunities to practice:

- Installing and utilizing Linux as a virtual machine or remotely
- Processing bio data with the programming language AWK
- Managing data with the relational database system MariaDB
- Analyzing and visualizing data with R
- Implementing good bioinformatics practices with Jupyter Notebook and GitHub

This book targets both students and professionals in the life sciences. While it is aimed at beginners, it also provides valuable tips and tricks for experienced researchers dealing with large datasets. 

Worked examples illustrate how to utilize various bioinformatics tools such as BLAST, Clustal, PLINK, IGV, SAMtools, BCFtools, Mason2, Minimap, NCBI Datasets, Velvet, Jmol, and more for:

- Identifying bacterial proteins potentially associated with pathogenicity
- Querying molecular structures for redox-regulated enzymes
- Mapping and assembling real or simulated sequence reads
- Identifying and mapping molecular structure mutations in viruses
- Conducting genome-wide association studies

All software tools and datasets mentioned are freely available, and all code is accessible as Jupyter Notebooks on GitHub. Drawing from the author's experiences and knowledge gained from both academia and industry, this book provides a practical and comprehensive approach to bioinformatics.

 

Les mer
Provides a learning by doing approach for beginners who are starting to program for data analysis Introduces efficient techniques for data processing, management, analysis and visualization Includes worked examples to practice illustrated tips and tricks
Les mer
GPSR Compliance The European Union's (EU) General Product Safety Regulation (GPSR) is a set of rules that requires consumer products to be safe and our obligations to ensure this. If you have any concerns about our products you can contact us on ProductSafety@springernature.com. In case Publisher is established outside the EU, the EU authorized representative is: Springer Nature Customer Service Center GmbH Europaplatz 3 69115 Heidelberg, Germany ProductSafety@springernature.com
Les mer

Produktdetaljer

ISBN
9783031703133
Publisert
2025-02-19
Utgave
3. utgave
Utgiver
Springer International Publishing AG
Høyde
235 mm
Bredde
155 mm
Aldersnivå
Professional/practitioner, P, 06
Språk
Product language
Engelsk
Format
Product format
Innbundet
Antall sider
31